FilterApplier.php

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<?php
namespace Magento\Bundle\Model\ResourceModel\Selection\Collection;

use Magento\Bundle\Model\ResourceModel\Selection\Collection;

class FilterApplier
{
    private $conditionTypesMap = [
        'eq' => ' = ?',
        'in' => 'IN (?)'
    ];

    public function apply(Collection $collection, $field, $value, $conditionType = 'eq')
    {
        foreach ($collection->getSelect()->getPart('from') as $tableAlias => $data) {
            if ($data['tableName'] == $collection->getTable('catalog_product_bundle_selection')) {
                $field = $tableAlias . '.' . $field;
            }
        }

        $collection->getSelect()
            ->where($field . $this->conditionTypesMap[$conditionType], $value);
    }
}